BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H05LP1|AL425773
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1498 0.0
>3x_Contig1775
Length = 26320
Score = 1498 bits (755), Expect = 0.0
Identities = 769/773 (99%), Gaps = 1/773 (0%)
Strand = Plus / Plus
Query: 1 cctgctcttgctttgcctcttgctctggctctggctctgcc-tgcgtctaagtttactac 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 25103 cctgctcttgctttgcctcttgctctggctctggctctgccctgcgtctaagtctactac 25162
Query: 60 ttctcttcatactagacactatatattttttcttttgaattccctttctgcagttgattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25163 ttctcttcatactagacactatatattttttcttttgaattccctttctgcagttgattt 25222
Query: 120 atagatcgtgtcgtatcgtattgaatcgtattgtttccctattctcacagtttttggttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25223 atagatcgtgtcgtatcgtattgaatcgtattgtttccctattctcacagtttttggttt 25282
Query: 180 cgatacacgactttcacctgcaattccaattcctcaattagaacactccagactactccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25283 cgatacacgactttcacctgcaattccaattcctcaattagaacactccagactactccc 25342
Query: 240 ttttccacttgtacgaggatataaagattaaacttaaactcaatataaattctctacgtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25343 ttttccacttgtacgaggatataaagattaaacttaaactcaatataaattctctacgtt 25402
Query: 300 ctaaaatcactactttgaaatcaacatcttaaacctgatatataatgtatgaagcttaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25403 ctaaaatcactactttgaaatcaacatcttaaacctgatatataatgtatgaagcttaaa 25462
Query: 360 ggctgtttgcattttgaagcacaattcgaaatttgaaaatttgaaaaaaaaaaaaaatcg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25463 ggctgtttgcattttgaagcacaattcgaaatttgaaaatttgaaaaaaaaaaaaaatcg 25522
Query: 420 cgaaaccaaatataagtycgggtaatcgagttatctgccaatctttcattttcattttta 479
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25523 cgaaaccaaatataagtccgggtaatcgagttatctgccaatctttcattttcattttta 25582
Query: 480 agttctcgcgcgttctttgctgttcttgacagttgacaatgcataatttacttgacattt 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25583 agttctcgcgcgttctttgctgtacttgacagttgacaatgcataatttacttgacattt 25642
Query: 540 acgtgaatagaggaggcttaaatgaatctttgacactgtatagatctataaacatcactt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25643 acgtgaatagaggaggcttaaatgaatctttgacactgtatagatctataaacatcactt 25702
Query: 600 aacacttgtgctgaaagttctttgtgtatgccgtttacttccgctactcatgtcatctgg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25703 aacacttgtgctgaaagttctttgtgtatgccgtttacttccgctactcatgtcatctgg 25762
Query: 660 cccgccgtcttatgagttaaatacacttttctgtggtcgtattatccccaatacacccac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25763 cccgccgtcttatgagttaaatacacttttctgtggtcgtattatccccaatacacccac 25822
Query: 720 acatcacatactatactgcaggttttcttactctcttcgcctcgccctttttg 772
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25823 acatcacatactatactgcaggttttcttactctcttcgcctcgccctttttg 25875
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,957
Number of Sequences: 1807
Number of extensions: 14957
Number of successful extensions: 378
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 16
effective length of query: 756
effective length of database: 10,329,639
effective search space: 7809207084
effective search space used: 7809207084
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)